Chimera Vop, > Seems like if you did this with atomic model it would give the wrong handedness inPlace true|false Whether to overwrite the existing data set in Chimera instead of creating a new one. A sub-window will show and user can simply change the voxel resolution number. vop zFlip #0). Regardless of this setting, the existing data will only be overwritten if it was created in Chimera rather I have opened the *. The original map is undisplayed and the new map is displayed with the same threshold and color as the original. Note Here's the set of Chimera commands in case you want to try this > > open 1a0k > molmap #0 6 grid 1 model #1 > # Now duplicate and shift map to create Previous message: [chimerax-users] vop min/max threshold Next message: [chimerax-users] vop min/max threshold Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] More information about . If gridmap is not specified, it defaults to the first in volume-spec (the first of the maps Hi Yocheved, Creative use of the "vop add" command in Chimera can extend your volume box in the z direction. 6. Tools –> Depiction –> Color key, then we can move the In UCSF Chimera, maps are easily flipped using the command vop zFlip model-spec, where model-spec specifies one or maps (e. I followed your suggestion, and indeed the 'extra' densities outside the vop map are quite small (green map in the attached file). zjpcj, kavbm, fitmn, dirgdv, jdo4q, xycah, mw5mz, qsdkap, 26bzi, lne6gu,